bend.it® Server: References

[1] Use this as a general reference: Vlahovicek, K., Kaján and Pongor, S. (2003): "DNA analysis servers: plot.it., bend.it, model.it and IS" Nucleic Acids Res., 31(13), 3686-7

[2]Gabrielian, A., Vlahovicek, K. and Pongor S. (1997): "Distribution of sequence-dependent curvature in genomic DNA" FEBS Letters, 406, 69-74

[3] Gabrielian, A., Simoncsits, A. and Pongor, S. (1996): "Distribution of Bending Propensity in DNA Sequences" FEBS Letters, 393, 124-130

[4] Gabrielian, A., Pongor, S. (1996) "Correlation of intrinsic DNA curvature with DNA property periodicity", FEBS Letters, 393, 65-68

[5] Brukner, I., Sanchez, R., Suck, D. and Pongor, S. (1995) "Sequence dependent bending propensity of DNA as revealed by DNAse  I: Parameters for trinucleotides" EMBO J. 14, 1812-1818.

[6] Goodsell, D.S. and Dickerson, R.E. (1994) "Bending and curvature calculations in B-DNA" Nucl. Acids Res. 22, 5497-5503

 

 


Andrei Gabrielian, Kristian Vlahovicek & Sándor Pongor