DPX

Depth index
Web server
 
Welcome to the DPX server!
This server calculates the atom depth from a three-dimensional protein structure.
The method is explained in:

Pintar A., Carugo O. and Pongor S, DPX: for the analysis of the protein core., Bioinformatics 2003 Jan 22;19(2):313-314

Please cite the above reference if you publish results obtained using this server.
 
To run the calculation, submit a PDB file containing a single structure. Please see help and guidelines on how to prepare your input file BEFORE you try to submit anything!
Optional parameters
radius of the sphere (angstrom)
calculate mean DPX per residue