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Probability of Identity #2
 Protein fold similarity
Web server
 

Welcome to the PRIDE2 server!

This server calculates the PRobability of IDEntity between three-dimensional domains (or whole structures). For a detailed explanation and references to cite see the description page. An evaluation of the perfomance of the server is also available.
The new PRIDE-NMR server is capable of comparing NOE restraint sets to folds in the SCOPselect database. Please read the PRIDE-NMR help page before submitting your data.
Fold identification: as of August 24, 2006, the server uses the new CATHselect database based on CATH release 3.0.0.
PDBselect scan: as of September 21, 2006, the server uses an updated PDBselect database based on the 2006 March release of PDB SELECT.

  PRIDE2 help You can find a brief method explanation and help on using the server by following this link. Please read the help before trying to submit your structures to the PRIDE2 server.
 
You can choose between three available methods. Follow the links to find out more!
  PRIDE2 cluster Perform an "all against all" comparison on the submitted structures
 
  PRIDE2 fold identification Compare your structure(s) to the CATHselect database
 
  PRIDE2 PDBselect scan Compare your structure(s) to the PDBselect database
 
  PRIDE-NMR Compare your NOE restraint set to the SCOPselect database

Alternatively, you may wish to try the original PRIDE Server @ ICGEB

 
Questions and suggestions regarding the PRIDE2 server should go to Zoltán Gáspári (szpari at chem.elte.hu) ©KV2002 & ZG2004